Insertion junction: LMJ.RY0402.233950_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.233950
Chromosome:chromosome 9
Location:7147276
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g411975 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCGCCATGCCGTCTCGGTGCCGCATAT
Internal bar code:CAAAGGGTTGTGGGTCGCTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:790
LEAP-Seq percent confirming:98.1445
LEAP-Seq n confirming:2486
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTCTCCGTCTCGGTCTC
Suggested primer 2:TTCCGTCACGTGTTGACATT