Insertion junction: LMJ.RY0402.233957_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.233957
Chromosome:chromosome 6
Location:7362469
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g299150 PHC9,PHC26 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 26 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTGCAGTACGGTAGTCTAAGAAGCATCA
Internal bar code:AATCGACGTGCCATGGAACGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:602
LEAP-Seq percent confirming:98.6328
LEAP-Seq n confirming:1515
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:TCACACCCTGCGTCATGTAT
Suggested primer 2:TGTACCGCCTGCACATACAT