Insertion junction: LMJ.RY0402.234021_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.234021
Chromosome:chromosome 11
Location:2059665
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g468700 CPLD65,HCAR1 7-hydroxymethyl chlorophyll a reductase; (1 of 1) 1.17.7.2 - 7-hydroxymethyl chlorophyll a reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAGTACAGCTTCCAATCTATGCATGATT
Internal bar code:TTCACACGATTCGGCAGATTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:99.4364
LEAP-Seq n confirming:2823
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGGACACGCCCTACAAG
Suggested primer 2:CTGCCCGTACATGTTGACAG