Insertion junction: LMJ.RY0402.234021_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.234021
Chromosome:chromosome 11
Location:2059666
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g468700 CPLD65,HCAR1 7-hydroxymethyl chlorophyll a reductase; (1 of 1) 1.17.7.2 - 7-hydroxymethyl chlorophyll a reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTGTGATCGCCTGACGCCTGTTGTGAAG
Internal bar code:AGCTCTTGGCAGGGTGGGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:656
LEAP-Seq percent confirming:95.68
LEAP-Seq n confirming:2392
LEAP-Seq n nonconfirming:108
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGGACACGCCCTACAAG
Suggested primer 2:CTGCCCGTACATGTTGACAG