Insertion junction: LMJ.RY0402.234056_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.234056
Chromosome:chromosome 16
Location:4296004
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g667900 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor; ANT-subfamily ortholog 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTTGCAAAATAGAGTAATATTTCTTTA
Internal bar code:CGACGGGAGCAAAAGTTCGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:596
LEAP-Seq percent confirming:96.8768
LEAP-Seq n confirming:1644
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCGATTACCTGACCTGC
Suggested primer 2:CACAGTCGTGACACCAGCTT