Insertion junction: LMJ.RY0402.234112_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.234112
Chromosome:chromosome 7
Location:2352080
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g328226 (1 of 6) IPR000817 - Prion protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGCCCGGCCTCGTTCTTGGTTTCTGCCC
Internal bar code:TGAACACGAGAAGTGCTGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:480
LEAP-Seq percent confirming:98.6813
LEAP-Seq n confirming:1347
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGGCTGGTATCTTCACC
Suggested primer 2:CGGCAACAGCAGCAGTAGTA