Insertion junction: LMJ.RY0402.234125_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.234125
Chromosome:chromosome 17
Location:795605
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g701809 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTGGAGACAGCTCGCAAAACCAACGCC
Internal bar code:CGTGGGCGGACGATAAATCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:416
LEAP-Seq percent confirming:98.8166
LEAP-Seq n confirming:167
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCAATGCATTTCTTTGTT
Suggested primer 2:CCGCACATAAGGTTCGATTT