Insertion junction: LMJ.RY0402.234165_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.234165
Chromosome:chromosome 16
Location:559191
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g692500 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCGGGCTGTTGTCTGGCGGTGCGCTTG
Internal bar code:GCGGCAACCGGTGCGAGTGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:554
LEAP-Seq percent confirming:67.6736
LEAP-Seq n confirming:5332
LEAP-Seq n nonconfirming:2547
LEAP-Seq n unique pos:133

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGCCGCTAGACAACTTT
Suggested primer 2:CCTCCCATTCGACTCCTACA