Insertion junction: LMJ.RY0402.234223_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.234223
Chromosome:chromosome 1
Location:5720402
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g040801 (1 of 3) PTHR18937//PTHR18937:SF254 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAACCTGCCCACGACTACACACGACCCC
Internal bar code:AAATCTAACTGGGCTCGGTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1231
LEAP-Seq percent confirming:97.6959
LEAP-Seq n confirming:212
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TTTACCAACTTGACAGGGGC
Suggested primer 2:CCTTGTCTGTATGCACCCCT