Insertion junction: LMJ.RY0402.234284_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.234284
Chromosome:chromosome 17
Location:4040895
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g729101 PHC37 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Putative pherophorin-chlamydomonas homolog CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGAACAGCAACAACAAGTGCTGCCCCTC
Internal bar code:GGTAAATTTGCAATGTAGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1065
LEAP-Seq percent confirming:97.6526
LEAP-Seq n confirming:624
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCTTCGAGTATGAAGC
Suggested primer 2:CTTCCATGTACCGTACCGCT