Insertion junction: LMJ.RY0402.234300_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.234300
Chromosome:chromosome 13
Location:5091734
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g607250 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCCGTGGGTCTGGCGCCCGCACCCCCC
Internal bar code:AGTCGGTCGTACCGAGGGGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:440
LEAP-Seq percent confirming:80.9272
LEAP-Seq n confirming:611
LEAP-Seq n nonconfirming:144
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GTGAGGAGGGCTTGTAGTGC
Suggested primer 2:AGTCAGCAGCTGGAGTACGG