Insertion junction: LMJ.RY0402.234337_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.234337
Chromosome:chromosome 3
Location:5379416
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g184550 LPA3,CPLD28 (1 of 1) PTHR34051:SF2 - PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC; Low Photosystem II Accumulation 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGCGGACCGGCTGGCCCCACTGCTTGC
Internal bar code:GAAAATAGCAGGTGCGGCACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:334
LEAP-Seq percent confirming:82.5982
LEAP-Seq n confirming:2734
LEAP-Seq n nonconfirming:576
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGCTCCCCAACACACCT
Suggested primer 2:CCCACCCACAGCTTTAAGAA