Insertion junction: LMJ.RY0402.234393_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.234393
Chromosome:chromosome 3
Location:9043295
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g210513 (1 of 2) K05894 - 12-oxophytodienoic acid reductase (OPR) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTACAGCGTGTGAGCGGCGCGTACACGA
Internal bar code:AAGTCACTATCGTATACTCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:514
LEAP-Seq percent confirming:97.3333
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTACACCTGGTAGCCCT
Suggested primer 2:GAAAGCTTCAACAAGCAGGG