Insertion junction: LMJ.RY0402.234452_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.234452
Chromosome:chromosome 9
Location:2009775
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g394400 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACATGTAGAAGGAGGCTGTCGTCCGCAA
Internal bar code:TGATGTGGACCGGAGTTTTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:271
LEAP-Seq percent confirming:57.3575
LEAP-Seq n confirming:1107
LEAP-Seq n nonconfirming:823
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTGTGTGTGTGTGTGT
Suggested primer 2:AGCCTGTACCAAACCACCAG