Insertion junction: LMJ.RY0402.234625_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.234625
Chromosome:chromosome 7
Location:910619
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g318950 (1 of 1) IPR000008//IPR000104//IPR003072 - C2 domain // Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCACCGCACACGGATGCCAGCAGAGGT
Internal bar code:AATAGGTGTCCCGATGGAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:350
LEAP-Seq percent confirming:94.3623
LEAP-Seq n confirming:1021
LEAP-Seq n nonconfirming:61
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATGGAGTTGCTCACCAC
Suggested primer 2:CTCACACAGCTGCTCACCTC