Insertion junction: LMJ.RY0402.234654_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.234654
Chromosome:chromosome 13
Location:455133
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g564850 (1 of 1) PTHR31651:SF3 - AUXIN EFFLUX CARRIER FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTGAGCCGTACCTAGGTGACGTGTATA
Internal bar code:CGCGAAAACCTGCAAGGGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:643
LEAP-Seq percent confirming:98.9482
LEAP-Seq n confirming:1317
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGGAAGAGAGGATTGGA
Suggested primer 2:ACTATGTCAACAGCCGGGTC