Insertion junction: LMJ.RY0402.234752_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.234752
Chromosome:chromosome 16
Location:560079
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g692500 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGGCAGCAGGCGGTGAGTGCATCTGTAT
Internal bar code:TCGCCGCCGCGCGTGGGCACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:196
LEAP-Seq percent confirming:15.3747
LEAP-Seq n confirming:357
LEAP-Seq n nonconfirming:1965
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCGTTACTACCCGTCAT
Suggested primer 2:ACAAGCTGCGGTCTTGACTT