Insertion junction: LMJ.RY0402.234752_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.234752
Chromosome:chromosome 16
Location:560101
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g692500 (1 of 19) PTHR31251:SF1 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 10-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTTACACTGCTGGCAGAAGCGGTATCGG
Internal bar code:CTGTGCTGGCGTCGCGGGGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:715
LEAP-Seq percent confirming:97.5727
LEAP-Seq n confirming:5266
LEAP-Seq n nonconfirming:131
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCCGTTACTACCCGTCAT
Suggested primer 2:ACAAGCTGCGGTCTTGACTT