Insertion junction: LMJ.RY0402.234808_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.234808
Chromosome:chromosome 1
Location:328634
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g001950 Predicted protein with 3-phosphoshikimate1-carboxyvinyltransferase core domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGACTGGCCCCGTCGGCCCCTCCGCTTT
Internal bar code:CCGAAAATTCTTCAGCTCTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:566
LEAP-Seq percent confirming:85.6663
LEAP-Seq n confirming:3060
LEAP-Seq n nonconfirming:512
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGTGTGTCAACTGGGAA
Suggested primer 2:CTGGTCATGTTGTGGGAGTG