Insertion junction: LMJ.RY0402.235104_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.235104
Chromosome:chromosome 17
Location:1139991
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g704300 FAP47 Flagellar Associated Protein 47; (1 of 1) PTHR23053//PTHR23053:SF2 - DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1 // PRIMARY CILIARY DYSKINESIA PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTGCACGAGCCGGCGGAGCCGCTGCCCA
Internal bar code:GGCAGCCGATGTTGCTACTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:876
LEAP-Seq percent confirming:98.9308
LEAP-Seq n confirming:19524
LEAP-Seq n nonconfirming:211
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCGCTGTTGATTGGAGT
Suggested primer 2:AGATCATGACGGTGCGTGTA