Insertion junction: LMJ.RY0402.235121_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.235121
Chromosome:chromosome 10
Location:3738026
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g446500 CPO1,CPL24 (1 of 1) PTHR14241//PTHR14241:SF10 - INTERFERON-INDUCED PROTEIN 44 // VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN DDB_G0292188; Conserved in the Plant Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTCCACCACCTACACAATGGTCGTCCTG
Internal bar code:CTCAAGCGAAATTCCCTGTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1319
LEAP-Seq percent confirming:98.7355
LEAP-Seq n confirming:16163
LEAP-Seq n nonconfirming:207
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTCCTCTGCTACTGCTA
Suggested primer 2:GGTATTTGCGTATGTGTGCG