Insertion junction: LMJ.RY0402.235176_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.235176
Chromosome:chromosome 3
Location:2969192
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g163500 EX1,CGLD21 Executer 1, chloroplastic; (1 of 1) PTHR33917//PTHR33917:SF1 - FAMILY NOT NAMED // PROTEIN EXECUTER 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGTCTTGATGCACCAACGTTATTCATTC
Internal bar code:ATTATTCAAGTTGGTTTCCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:930
LEAP-Seq percent confirming:97.4138
LEAP-Seq n confirming:339
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CTACATGCATGGGACGTTTG
Suggested primer 2:CTGTGTGTACAGCATCGCCT