Insertion junction: LMJ.RY0402.235199_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.235199
Chromosome:chromosome 3
Location:1281504
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g150251 (1 of 80) IPR003882 - Pistil-specific extensin-like protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGTGCTGTGCACGAGCAGCATGGCTGCT
Internal bar code:CCCTGGCCTCAAAAGCTCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:519
LEAP-Seq percent confirming:99.244
LEAP-Seq n confirming:8533
LEAP-Seq n nonconfirming:65
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CAAGCGTGATCTCAACCTCA
Suggested primer 2:TGACAGACAATGCCAAGAGC