Insertion junction: LMJ.RY0402.235387_6

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.235387
Chromosome:chromosome 17
Location:1143419
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g704300 FAP47 Flagellar Associated Protein 47; (1 of 1) PTHR23053//PTHR23053:SF2 - DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1 // PRIMARY CILIARY DYSKINESIA PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGGTCCAACCAGATCAAGGCGCCGTAC
Internal bar code:CCCTCCTGACGGCTGGTGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:197
LEAP-Seq percent confirming:99.5832
LEAP-Seq n confirming:2389
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCTCCAGGTTGTCGTAGC
Suggested primer 2:CTGGATACGGGACAAGGAAA