Insertion junction: LMJ.RY0402.235414_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.235414
Chromosome:chromosome 10
Location:4583319
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g452550 HOPP1,HOP1 Homologous-pairing protein 1; (1 of 3) PF02301 - HORMA domain (HORMA) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTAGATGGGAATGGACGGAGGTTCAGGGG
Internal bar code:GCTCGTATTACCTCGGCTACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:624
LEAP-Seq percent confirming:98.2449
LEAP-Seq n confirming:2463
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:72

Suggested primers for confirmation by PCR

Suggested primer 1:CATTCACGTTGACCCAGTTG
Suggested primer 2:GAGGCACAGTCTGTACGCAA