Insertion junction: LMJ.RY0402.235547_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.235547
Chromosome:chromosome 13
Location:1366042
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g571700 CDPK9 (1 of 1) PF00069//PF07714//PF13499 - Protein kinase domain (Pkinase) // Protein tyrosine kinase (Pkinase_Tyr) // EF-hand domain pair (EF-hand_7); Calcium/calmodulin-dependent protein kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGATAGTCGCGTAGCGTAAAGGGTCTAC
Internal bar code:CCAGGGCAATCAGATAAGGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:495
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ATGATGGCGATTTCCTTGAG
Suggested primer 2:TGATGGTTTTGCAGTGGTGT