Insertion junction: LMJ.RY0402.235646_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.235646
Chromosome:chromosome 5
Location:3139313
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g239300 (1 of 85) IPR009057 - Homeodomain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAATCGGGCTCCCAAGTCGAACGGATTAG
Internal bar code:TACATTTGCGCGTCCGTAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:392
LEAP-Seq percent confirming:99.6499
LEAP-Seq n confirming:1708
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCGTAAGCTCGGTGAGG
Suggested primer 2:ACAGGTATGCCGTACCAAGC