Insertion junction: LMJ.RY0402.235647_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.235647
Chromosome:scaffold 24
Location:68913
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre24.g755597 Chlorophyll a /Pheophorbide a oxygenase-related protein; (1 of 2) 1.14.13.122 - Chlorophyllide-a oxygenase / Cholorophyll-b synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCGACATACTCGGCGAAACAAGGGACA
Internal bar code:TTGACGCATAGGTGAAAAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:403
LEAP-Seq percent confirming:53.5211
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGACACACAAGGAAACAA
Suggested primer 2:CTCTTACCTTGAAGGCGACG