Insertion junction: LMJ.RY0402.235798_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.235798
Chromosome:chromosome 10
Location:2319644
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g434800 (1 of 1) PF00515//PF02151//PF13414 - Tetratricopeptide repeat (TPR_1) // UvrB/uvrC motif (UVR) // TPR repeat (TPR_11) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGCCTGCCACCAGCTCGATGCAGTCCTG
Internal bar code:TAATGTGGTAAAACTTAATCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1009
LEAP-Seq percent confirming:99.398
LEAP-Seq n confirming:10403
LEAP-Seq n nonconfirming:63
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACGGTCAACTACCTCAT
Suggested primer 2:GTAGTGACCGGGACAAGGAA