Insertion junction: LMJ.RY0402.235823_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.235823
Chromosome:chromosome 9
Location:4010304
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g392951 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCCCGCCCGCCCACCATTCTACGTGAT
Internal bar code:GTATTTAATGACATACTGTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:951
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTCTTGGGATCGCTGTAT
Suggested primer 2:GTGATGGACAAGGCTACCGT