Insertion junction: LMJ.RY0402.236112_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.236112
Chromosome:chromosome 3
Location:2966283
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g163400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGTCCCGGCCCAATCCACGGCCTCCGAC
Internal bar code:GCCGATAGTCTCTAGCAGATCA

Confirmation - LEAP-Seq

LEAP-Seq distance:800
LEAP-Seq percent confirming:98.6306
LEAP-Seq n confirming:2881
LEAP-Seq n nonconfirming:40
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AGGATCCCATGGGTACATGA
Suggested primer 2:AAAAGAATCATGTACGGCGG