Insertion junction: LMJ.RY0402.236139_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.236139
Chromosome:chromosome 3
Location:4097103
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g172900 (1 of 2) PF11371 - Protein of unknown function (DUF3172) (DUF3172) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTCTCTTCTCTCCAACGGAAAGTGGACC
Internal bar code:TTTTCGGGATTTGTGATCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:645
LEAP-Seq percent confirming:98.6066
LEAP-Seq n confirming:1203
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCATGCGCTAACAGGCTATG
Suggested primer 2:CGGGCTGTTCTGCTAGTACC