Insertion junction: LMJ.RY0402.236338_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.236338
Chromosome:chromosome 6
Location:3163396
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g275450 (1 of 1) PF00069//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat (LRR_8) 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCTTTCTGCTGCAGTCACAGCCCCTGGC
Internal bar code:GGGTTTTCTGCCGTTCCGGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:612
LEAP-Seq percent confirming:98.7397
LEAP-Seq n confirming:1802
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CAACAGCCTCACAGTCTCCA
Suggested primer 2:ACTGGGACGTACTGGGAGTG