Insertion junction: LMJ.RY0402.236442_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.236442
Chromosome:chromosome 5
Location:913245
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g247300 (1 of 1) PF13432//PF13489 - Tetratricopeptide repeat (TPR_16) // Methyltransferase domain (Methyltransf_23) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACCTTCACCCGTGCCTGCGACGTGGCC
Internal bar code:GGGGCCCTAATGCCAAACTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:658
LEAP-Seq percent confirming:99.3995
LEAP-Seq n confirming:15228
LEAP-Seq n nonconfirming:92
LEAP-Seq n unique pos:137

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCCGTCCATTTGGAGAA
Suggested primer 2:GAGGATGTTGCTGATGCTGA