Insertion junction: LMJ.RY0402.236444_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.236444
Chromosome:chromosome 9
Location:1785846
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g396250 VTE5 Phosphatidate cytidylyltransferase; (1 of 1) K18678 - phytol kinase (VTE5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCTCCACAGTTCCATCCACACTACCCC
Internal bar code:TTATAGTCTGGCAGGTTTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:95.5
LEAP-Seq n confirming:191
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCCACTTCCTTAACCAAT
Suggested primer 2:GCGACCTACCTCTCTGCAAC