Insertion junction: LMJ.RY0402.236566_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.236566
Chromosome:chromosome 8
Location:827265
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g360850 (1 of 1) K18798 - protein AFG1 (AFG1, LACE1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGCTTGCTTCAAAACGGACGGGTAAAC
Internal bar code:GACGTGGAAAAGTAGTTAATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:493
LEAP-Seq percent confirming:98.6842
LEAP-Seq n confirming:75
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGCTCTGAGAGGTGCTG
Suggested primer 2:GCATGTCTAGGGCAGGAGAG