Insertion junction: LMJ.RY0402.236615_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.236615
Chromosome:chromosome 7
Location:820050
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g318350 CGL64 (1 of 4) PF12576 - Protein of unknown function (DUF3754) (DUF3754); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTTACTAACTCCCATCACCCCAGGAAG
Internal bar code:CCCCGCGGCTTGCACGCCGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:516
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACACGAGGGGTAGCATC
Suggested primer 2:GACGCTAAAGTAACGACGGC