Insertion junction: LMJ.RY0402.236767_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.236767
Chromosome:chromosome 9
Location:3369923
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g388726 (1 of 1) 3.1.3.32 - Polynucleotide 3'-phosphatase / 2'(3')-polynucleotidase intron|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCGGACAAACTGTGCCGGAGTGTCCAA
Internal bar code:ATGCTCCAACACGATCTGGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:593
LEAP-Seq percent confirming:98.9051
LEAP-Seq n confirming:813
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAATGCAGTGCAGGGTTT
Suggested primer 2:TCAGTGTCACGCAGGATAGC