Insertion junction: LMJ.RY0402.236842_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.236842
Chromosome:chromosome 2
Location:6957170
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g120250 CDPK7,STT7 (1 of 3) PTHR11584:SF316 - SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC; Chloroplast protein kinase required for state transitions 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACAGTCGGGGCAACAGAACGAGCCCCAA
Internal bar code:TGGGACGGGCTTTACCAGATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:630
LEAP-Seq percent confirming:99.4058
LEAP-Seq n confirming:1673
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:ATTCGGAGGTTCCATGAGTG
Suggested primer 2:GGCTCCTCATGACGCTAGTC