Insertion junction: LMJ.RY0402.236856_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.236856
Chromosome:chromosome 6
Location:3512454
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g278107 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCGCTCGCTCGTTCCTGAACGTTCCCA
Internal bar code:TGGGTTACCTGTTAGAGCGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:343
LEAP-Seq percent confirming:99.1228
LEAP-Seq n confirming:226
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATAGAAGCGTTCGGGAC
Suggested primer 2:AGGTGAGTCCATTTGTTGGC