Insertion junction: LMJ.RY0402.236858_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.236858
Chromosome:chromosome 3
Location:4375859
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g175351 LMR2 (1 of 14) PF01476 - LysM domain (LysM); Predicted protein with LysM domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGGAGCAGAGCAGGAAGCGTTATAGC
Internal bar code:CCCCCGAAAGGCGATCTCTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:898
LEAP-Seq percent confirming:99.2414
LEAP-Seq n confirming:2224
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AATAAGGTCTTGCCCGTGTG
Suggested primer 2:TCCCGACATTCCTTAACTGC