Insertion junction: LMJ.RY0402.236858_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.236858
Chromosome:chromosome 3
Location:4375901
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g175351 LMR2 (1 of 14) PF01476 - LysM domain (LysM); Predicted protein with LysM domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCTTCGGGTTCGTGCACCAAGGGCTGCA
Internal bar code:TCAGTTGCAGCCCAGCGAGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:647
LEAP-Seq percent confirming:85.3686
LEAP-Seq n confirming:9242
LEAP-Seq n nonconfirming:1584
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:AATAAGGTCTTGCCCGTGTG
Suggested primer 2:TCCCGACATTCCTTAACTGC