Insertion junction: LMJ.RY0402.236874_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.236874
Chromosome:chromosome 7
Location:4533326
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g343650 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAATCTAGCGATGGCATTGTAGGAACTT
Internal bar code:GGATGTGTCGACCCCGAGCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:280
LEAP-Seq percent confirming:91.0
LEAP-Seq n confirming:91
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCATATTTGCCCACTTGCTT
Suggested primer 2:AAGGCACCGTTCCATAACTG