Insertion junction: LMJ.RY0402.236981_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.236981
Chromosome:chromosome 1
Location:2670593
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g015600 (1 of 1) PTHR23346//PTHR23346:SF7 - TRANSLATIONAL ACTIVATOR GCN1-RELATED // TRANSLATIONAL ACTIVATOR GCN1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGAGAGCACGCGCGCGTGTGACCACTTTT
Internal bar code:GTACCACGTACTGGTTTAAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:675
LEAP-Seq percent confirming:99.4067
LEAP-Seq n confirming:9382
LEAP-Seq n nonconfirming:56
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCTCTGCATTGTTGTCTC
Suggested primer 2:GCTGCTCAAGCCCTTCAC