Insertion junction: LMJ.RY0402.237032_4

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.237032
Chromosome:chromosome 14
Location:1410025
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g617600 DEG9 Deg protease; (1 of 4) PTHR22939//PTHR22939:SF83 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 2, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCCCCTCTACCGCATGCTCGCGCGTTCC
Internal bar code:GTCACAGGCATCGGAGGCGCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:638
LEAP-Seq percent confirming:99.0706
LEAP-Seq n confirming:533
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCCCGTCATCCACTATCT
Suggested primer 2:CGTGTCTGTATCTCAGGCCA