Insertion junction: LMJ.RY0402.237100_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.237100
Chromosome:scaffold 36
Location:22471
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre36.g759697 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATTCACTGCTTCAACGGGTTGCTCACCT
Internal bar code:TCACGCCATGCGGAGCAGATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:611
LEAP-Seq percent confirming:96.7164
LEAP-Seq n confirming:324
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCTCATACGCTACACCA
Suggested primer 2:TAATCAATTGGTGCCTGCAA