Insertion junction: LMJ.RY0402.237111_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.237111
Chromosome:chromosome 3
Location:7544240
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g205150 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGTTGACTTGCGGGACGGTCGGGTTCTA
Internal bar code:ACAAAGCTTTCGAGCATAGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:711
LEAP-Seq percent confirming:60.5924
LEAP-Seq n confirming:1207
LEAP-Seq n nonconfirming:785
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCACACACCTGCTGTTC
Suggested primer 2:GACAGCTGGAATTTGGCAAT