Insertion junction: LMJ.RY0402.237301_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.237301
Chromosome:chromosome 1
Location:4726110
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g032550 CGL127 (1 of 1) K11267 - sister chromatid cohesion protein PDS5 (PDS5); Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACGCCTCGGCCTGAACTGCAATGTCTT
Internal bar code:ACGGGGGGCTTACCCTAACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1083
LEAP-Seq percent confirming:99.3167
LEAP-Seq n confirming:13227
LEAP-Seq n nonconfirming:91
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGACTCCTCTATCATGCC
Suggested primer 2:TTCACGCAGCTGACCTTATG