Insertion junction: LMJ.RY0402.237600_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.237600
Chromosome:chromosome 6
Location:3950525
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g278189 (1 of 11) PF00999 - Sodium/hydrogen exchanger family (Na_H_Exchanger) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCGCTAGGGCTGTGGTTTGGAGACACA
Internal bar code:GGTTCTCGTGTTGGTGCTCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:472
LEAP-Seq percent confirming:99.5021
LEAP-Seq n confirming:26378
LEAP-Seq n nonconfirming:132
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCAATGGGTAGACGTTGG
Suggested primer 2:GCCATCATCCTGTTGAACCT