Insertion junction: LMJ.RY0402.237667_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.237667
Chromosome:chromosome 3
Location:2778132
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g161976 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCTGGCATCGACCAAGCTACGGGCACTA
Internal bar code:AAAAGTCCACACTGGCTTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:895
LEAP-Seq percent confirming:99.3964
LEAP-Seq n confirming:13009
LEAP-Seq n nonconfirming:79
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCAGCTCACCAAAATGAG
Suggested primer 2:CGTGTCATACCCAGCATACG